Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASEPGGSGGGEAAALGLKLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDLCLADGLRALACLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGVGVTRYLAIAHHRFYAERLAGWPCAAMLVCAAWALAL-----AAAFPPVLDGGGDDEDAPCALEQRPDGAPGALGFLLLLAVVVGATHL-VYLRLLFFIHDRR---KMRPARLVPAVSHDWTFHGPGATGQAAANWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEFKTEKRLCKMFYAVTLLFLLLWGPYVVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQFPCCQSPRTTQATHPCDLKGIGL |
| 4MQT Chain:A ((36-334)) | ----------KTFEVVFIVLVAGSLSL---VTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYT----VIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTT-KMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAA-------VTFGTAIAAFYLPVIIMTVLYWHISRASK--------------------------------------------------PSR-------------EKKVTRTILAILLAFIITWAPYNVMVLINTFCAP-CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMC-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237222 for 1936 contacts (-122.5/contact) +
2D Compatibility (PS) -28986 + (NN) -30107 + (LL) 4592
1D Compatibility (HY) -26400 + (ID) 3450
Total energy: -321573.0 ( -166.10 by residue)
QMean score : 0.304
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