Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRHHLQDHFLEIDKKNCCVFRDDFIAKVLPPVLGLEFIFGLLGNGLALWIFCFHLKSWKSSRIFLFNLAVADFLLIICLPFVMDYYVRRSDWKFGDIPCRLVLFMFAMNRQGSIIFLTVVAVDRYFRVVHPHHALNKISNWTAAIISCLLWGITVGLTVHLLKKKLLIQNGTANVCISFSICHTFRWHEA----MFLLEFFLPLGIILFCSARIIWSLR-QRQMDRHAKIKRAITFIMVVAIVFVICFLPSVVVRIHIF---WLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPSFPNFFSTLINRCLQRKITGEPDNNRSTSVELTGDPNKTRGAPEALIANSGEPWSPSYLGPTSNNHSKKGHCHQEPASLEKQLGCCIE |
4RWA Chain:A ((136-406)) | ----------------------------------------GLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMET-WPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLL---GSKEKDRS--LRRITRMVLVVVGAFVVCWAP-----IHIFVIVWTLVDIDRRDPLVVA----ALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234101 for 1852 contacts (-126.4/contact) +
2D Compatibility (PS) -25860 + (NN) -4001 + (LL) 6408
1D Compatibility (HY) -26400 + (ID) 4150
Total energy: -288104.0 ( -155.56 by residue)
QMean score : 0.253
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