Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERAPPDGPLNASGALAGEAAAAGGARGFSAAWTAVLAALMALLIVATVLGNALVMLAFVADSSLRTQNNFFLLNLAISDFLVGAFCIPLYVPYVLTGRWTFGRGLCKLWLVVDYLLCTSSAFNIVLISYDRFLSVTRAVSYRAQQGDTRRAVRKMLLVWVLAFLLYGPAILSWEYLSGGSSI-PEGHCYAEFFYNWYFLITASTLEFFTPFLSVTFFNLSIYLNIQRRTR----------LRLDGAREAAG---------PEPPPEAQPSPPPPPGCWGCWQKG---HGEAMPLHRYGVGEAAVGA-----------------EAGEATLGGGGGGGSVASPTSSSG--SSSRGTERPRSLKRGSKPSASSASLEKRMKMVSQSFT--QRFRLSRDRKVAKSLAVIVSIFGLCWAPYTLLMIIRAACHGHCVPDYWYETSFWLLWANSAVNPVLYPLCHHSFRRAFTKLLCPQKLKIQPHSSLEHCWK |
| 3RZE Chain:A ((11-441)) | ------------------------------------LVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKT-RASATILGAWFLSFLWVIP-ILGWNH-------RREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAK-SRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCK-NCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188490 for 2648 contacts (-71.2/contact) +
2D Compatibility (PS) -38190 + (NN) -2628 + (LL) 2308
1D Compatibility (HY) -34800 + (ID) 5600
Total energy: -267400.0 ( -100.98 by residue)
QMean score : 0.221
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