Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLANSSSTNSSVLPCPDYRPTHRLHLVVYSLVLAAGLPLNALALWVFLRALRVHSVVSVYMCNLAASDLLFTLSLPVRLSYYALHHWPFPDLLCQTTGAIFQMNMYGSCIFLMLINVDRYAAIVHPLRLRHLRRPRVARLLCLGVWALILVFAVPAARV--HRPSRC--RYRDLEVRLCFESFSDELWKGRLLPLVLLAEAL--GFLLPLAAVVYSSGRVFWTLARPDATQSQRRRKTVRLLLANLVIFLLCFVPYNSTLAVYGLLRSKLVAASVPARDRVRGVLMVMVLLAGANCVLDPLVYYFSAEGFRNTLRGLGTPHRARTSATNGTRAALAQSERSAVTTDATRPDAASQGLLRPSDSHSLSSFTQCPQDSAL |
| 4XT3 Chain:A ((45-316)) | -------------------------LFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQY-LLDH---ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY-MRYRPVKQ---ACLFSIFWWIFAVIIAIPHFMVVTKKDNQCMTDYDYLEVSY---------------PIILNVELMLGAFVIPLSVISYCYYRISRIVA---VSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE---------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -237031 for 1951 contacts (-121.5/contact) +
2D Compatibility (PS) -27293 + (NN) -12523 + (LL) 4932
1D Compatibility (HY) -34800 + (ID) 4250
Total energy: -310965.0 ( -159.39 by residue)
QMean score : 0.276
|
|
|