Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNPFHASCWNTSAELLNKSWNKEFAYQTASVVDTVILPSMIGIICSTGLVGNILIVFTIIRSRK-KTVPDIYICNLAVADLVHIVGMPFLIHQWARGGEWVFGGPLCTIITSLDTCNQFACSAIMTVMSVDRYFALVQPFRLTRWRTRYKTIRINLGLWAASFILALPVWVYSKVIKFKDGVESCAFDLTSPDDVLW---YTLYLTITTFFFPLPLILVCYILILCYTWEMYQQNKDARCCNPSVPKQR-VMKLTKMVLVLVVVFILSAAPYHVIQLVNLQMEQPTLAFYVGYYLSIC--LSYASSSINPFLYILLSGNFQKRLPQIQRRATEKEINNMGNTLKSHF |
| 4EA3 Chain:A ((135-401)) | -------------------------------------------VCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGF-WPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSA-QVEDEEIECLVEIPTPQD-YWGPVFAICIFLFSFIVPVLVISVCYSL-------MIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVA-ILRFCTALGYVNSCLNPILYAFLDENFKACFR---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217659 for 1866 contacts (-116.6/contact) +
2D Compatibility (PS) -25765 + (NN) -6564 + (LL) 6888
1D Compatibility (HY) -29600 + (ID) 4400
Total energy: -277100.0 ( -148.50 by residue)
QMean score : 0.320
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