Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTVPVFGTKLTPINGREETPCY-----NQTLSFTV-LTCIISLVGLTGNAVVLWLLGYRMR-RNAVSIYILNLAAADFLFLSFQIIRLPLRLINI--SHLIRKILVSVMTFPYFTGLSMLSAISTERCLSVLWPIWYRCRRPTHLSAVVCVLLWGLSLLFSMLEWRFCDFLFSGADSSWCETS-DFIPVAWLIFLCVVLCVSSLVL-----------LVRILCGSRKMPLTRLYVTILLTVLVFLLCGLPFGILGALIYRMHL--------NLEVLYCHVYLVCMSLSSLNSSANPIIYFFVGS-FRQRQNRQNLKLVLQRALQDKPEVDKGEGQLPEESLELSGSRLGP |
| 4XT1 Chain:A ((25-309)) | ----------------DEDATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLF----VCTLPLWMQYLLD-----SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPH-----FMVVTKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYH-LTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235308 for 1749 contacts (-134.5/contact) +
2D Compatibility (PS) -25331 + (NN) -10924 + (LL) 4072
1D Compatibility (HY) -29200 + (ID) 3450
Total energy: -300141.0 ( -171.61 by residue)
QMean score : 0.267
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