Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPQNTSTVTNFQLLGFQNLLEWQALLFVIFLLIYCLTIIGNVVIITVVSQGLRLHSPMYMFLQHLSFLEVWYTSTTVP----LLLANLLSWGQAISFSACMAQLYFFVFLGATECFLLAFMAYDRYLAICSPLRYPFLMHRGLCARLVVVSWCTGVSTGFLPSLMISRLDFCGRNQINHFFCDLPPLMQLSC-----------SRVYITEVTIFILSIAVLCICFFLTLGPYVFIVSSILRIPSTSGRRKTFSTCGSHLAVVTLYYGTMISMY-VCPSPHLLPEINKIISVFYTVVTP---------------LLNPVIYSLRNKDFKEAVRKVMRRKCGILWSTSKRKFLY |
| 2YCY Chain:A ((10-297)) | ----------------------WEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFL----CELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDP-QALKCYQDPGCCDFVTNRAYAIASSIISFYIPLL-IMIFVALRVYREAKEQIR--DRAS-KRKRVMLMREHKALKTL--GIIMGVFTLCWLPFFL--VN-IVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211939 for 1738 contacts (-121.9/contact) +
2D Compatibility (PS) -25601 + (NN) -2048 + (LL) 4180
1D Compatibility (HY) -24800 + (ID) 3900
Total energy: -264108.0 ( -151.96 by residue)
QMean score : 0.187
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