Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENRNNMTEFVLLGLTENPKMQKIIFVVFFVIYIITVVGYVLIVVTITASPSLGSPMYLSLAYLSFIDACYSSVNTPNLITHSLYGKKAIL-FNGCMTQVFGEHFFGGAEGIL----LTVMAYDHYVAICKPLHYMTIMNQCVCALLMGVVWMGGFLHATIQILFIFQLPFCGPNVIDHFMCD--LNPLLNLACTDTHMLELFIAANSG-----FICLLNFALLLVSYVVILCSL--RTHSLEARH-KALSTCVSHITVVILFFVPCIFVYMRPAATL-------------PIDKAVAIFYTMITPMLNPLIYTLKNAQMKNAIRKLCSRKDISGDK |
4WW3 Chain:A ((52-320)) | -----------------------------------------------TKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAAC--KVYG--FIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIF------GWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -186615 for 1690 contacts (-110.4/contact) +
2D Compatibility (PS) -24256 + (NN) -7325 + (LL) 6292
1D Compatibility (HY) -19200 + (ID) 2900
Total energy: -234004.0 ( -138.46 by residue)
QMean score : 0.241
|
|
|