Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQVTNTTQEGIYFILTDIPGFEASHIWISIPVCCLYTISIMGNTTILTVIRTEPSVHQRMYLFLSMLALTDLGLTLTTLPTVMQLLWFNVRRISSEAC--FAQFFFLHGFSFMESSVLLAMSVDCYVAICCPLHYASILTNEVIGRTGLAIICCCVLAVLPSLFLLKRLPFCHSHLLSRSYCLHQDMIRLVCADIRLNSWYGFALALLIIIVDPLLIVI-----SYTLILKNILGTATWAERLRAL-------NNCLSHILAVLVL-YIPMVGVSMTHRFAKHASPLVHVIMANIYLLAPPVMNPIIYSVKNKQIQWGMLNFLSLKNMHSR |
| 2YCY Chain:A ((26-283)) | ----------------------------------------VAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIET--LCVIAIDRYLAITSPFRYQSLMT-----RARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYI-PLLIMIFVALRVYREAKEQIR--DRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233639 for 1704 contacts (-137.1/contact) +
2D Compatibility (PS) -24317 + (NN) -6093 + (LL) 4324
1D Compatibility (HY) -19200 + (ID) 3150
Total energy: -282075.0 ( -165.54 by residue)
QMean score : 0.143
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