Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRMSTSNHTQFHPSSFLLLGIPGLEDVHIWI---GVPFFFVYLVALLGNTALLFVIQTEQSLHEPMYYFLAMLDSIDLGLSTATIPKMLGIFWFNTKEISFGGCLSHMFFIHFFTAMESIVLVA-------MAFDRYIAICKPLRYTMILT-SKIISLIAGIAVLRSLYMVVPLVFLLLRLPFCGHRIIPHTYCEHMGIARLACASIKVNIRFGLGN-ISLLLLDVILIILSYVRILYAV------FCLPSWEARLKALNTCGSHIGVILAFFTPAFFSFLTHRFGHNIPQYIHIILANLYVVVPPALNPVIYGVRTKQIRERVLRIFLKTNH |
| 4LDE Chain:A ((179-447)) | -----------------------------EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVP--FGAAHILTKTWTFGN-----FWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRAT---HQEAINCYAEE------TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKFALKE----HKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -235915 for 1744 contacts (-135.3/contact) +
2D Compatibility (PS) -24487 + (NN) 881 + (LL) 3456
1D Compatibility (HY) -24000 + (ID) 3300
Total energy: -283365.0 ( -162.48 by residue)
QMean score : 0.228
|
|
|