Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNITADNSSMSCTIDHTIHQTLAPV---VYVTVLVVGFPANCLSLYFGYLQIKARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVGFLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHRVCFEH----YPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLVLSTVVIFLACFLPYHVLLLVRSV----W-EASCDFAKGVFNAYHFSLLLTSFNCVADPVLYCFVSETTHRDLARLRGACLAFLTCSRTGRAREAYPLGAPEASGKSGAQGEEPELLTKLHPAFQTPNSPGSGGFPTGRLA |
| 4XT3 Chain:A ((26-310)) | -------EDATPCVFTDVLNQS-KPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH-----ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIV----YMRYRPVKQACLFSIFWWIFAVIIAIPHFM--VVTKKDNQCMTDYDYLEVSYPI-----ILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGR---IVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229450 for 1981 contacts (-115.8/contact) +
2D Compatibility (PS) -26862 + (NN) -1669 + (LL) 3664
1D Compatibility (HY) -35600 + (ID) 4000
Total energy: -293917.0 ( -148.37 by residue)
QMean score : 0.191
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