Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERINHTSSVSEFILLGLSSRPEDQKTLFVLFLIVYLVTITGNLLIILAIRFNPHLQTPMYFFLSFLSLTDICFTTSVVPKMLMNFLSEKKTISYAGCLTQMYFLYALGNSDSCL--------LAVMAFDRYVAVCDPFHYVTTMSHHHCVLLVAFSCSFPHLHSLLHTLLLNRLTFCDSNVIHHFLCDLSP-VLKL----SCSSIFVNEIVQMTEAPIVLVTRFLCIAFSYIRIL----TTVLKIPSTSGKR--------KAFSTCGFYLTVVTLFYGSIFCVYLQPPSTYAVKDHVATIVYTVL------SSMLNPFIYSLRNKDLKQGLRKLMSKRS |
| 2YCZ Chain:A ((9-298)) | --------------------QWEAGMSL--LMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVII---CTVWAISALVSFL----------PIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNI---VNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184325 for 1727 contacts (-106.7/contact) +
2D Compatibility (PS) -25847 + (NN) -4643 + (LL) 3772
1D Compatibility (HY) -32400 + (ID) 3700
Total energy: -247143.0 ( -143.11 by residue)
QMean score : 0.198
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