Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTFSSFLQIGRNMHQGNQTTITEFILLGFFKQDEHQNLLFVLFLGMYLVTVIGNGLIIVAISLDTYLHTPMYLFLANLSFADIS-SISNSVPKMLVNIQTKSQSISYESCITQMYFSIVFVVIDNLLLGTMAYDHFVAICHPLNYTILMRPRFGILLTVISWFLSNIIALTHTLLLIQLLFCNHNTLPHFFCDLAPLLKLSCSDTLINELVLFIVGLSVIIFPFTLSFFSYVCIIRAVLRVSSTQGKWKAFSTCGSHLTVVLLFYGTIVGVYFFPSSTHPEDTDKIGAVLFTVVTPMINPFIYSLRNKDMKGALRKLINRKISSL
3AYM Chain:A ((65-227))-------------------------------------------------------------------LQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIG------PIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGF---FGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMI


General information:
TITO was launched using:
RESULT:

Template: 3AYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121729 for 1160 contacts (-104.9/contact) +
2D Compatibility (PS) -15900 + (NN) 2010 + (LL) 6876
1D Compatibility (HY) -17600 + (ID) 1950
Total energy: -148293.0 ( -127.84 by residue)
QMean score : 0.163

(partial model without unconserved sides chains):
PDB file : Tito_3AYM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AYM-query.scw
PDB file : Tito_Scwrl_3AYM.pdb: