Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNWENESSPKEFILLGFSDRAWLQMPLFVVLLISYTITIFGNVSIMMVCILDPKLHTPMYFFLTNLSILDLCYTTTTVPHMLVNIGCNKKTISYAGCVA-HLIIFLA-----LGATECLLLAVMSFDRYVAVCRPLHYVVIMNYWFCLRMAAFSWLIGFGNSVLQSSLTLNMPRCGHQEVDHFFCEVPALLKLSC--ADTKPIEAELFFFSVLILLIPVTLILISYGFI-AQAVLKIRSAEGR-----------QKAFGTCGSHMIVVSLF-------YGTAIYMYLQPPSSTSKDWGKMVSLFYGIITSMLNSLIYSLRNKDMKEAFKRLMPRIFFCKK |
3UZC Chain:A ((18-303)) | -----------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAI--------TISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFA---IGLTPMLGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215306 for 1828 contacts (-117.8/contact) +
2D Compatibility (PS) -25734 + (NN) -8887 + (LL) 4508
1D Compatibility (HY) -22400 + (ID) 3050
Total energy: -270869.0 ( -148.18 by residue)
QMean score : 0.204
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