Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEVLWPAVPNGTDAAFLAGPGSSWGNSTVASTAAVSSSFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTD-----WIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDT--TSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVR-----ALIYKDLDNSPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVDPILYFLAGDTFRRRLSRATRKASRRSEANLQSKSEDMTLNILPEFKQNGDTSL |
| 4EA3 Chain:A ((130-401)) | -------------------------------------------------------GLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLP------FQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIM-GSAQVEDEEIECLVEIPTPQDYWGP--VFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFV---LAQGLGVQPSSETAV-----AILRFCTALGYVNSCLNPILYAFLDENFKACFR------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240989 for 1891 contacts (-127.4/contact) +
2D Compatibility (PS) -25412 + (NN) 157 + (LL) 7020
1D Compatibility (HY) -25600 + (ID) 4050
Total energy: -288874.0 ( -152.76 by residue)
QMean score : 0.259
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