Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGRCFPPDTKEKQQLRMTKLCDPAESELSPFLITLILAVLLAEYLIGIIANGFIMAIHAAEWVQNKAVSTSGRILVFLSVSRIALQSLMMLEITISSTSLSFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANFSYPLFLKLRWRITGLIPWLLWLSVFISFSHSMFC-INICTVYCNNSFPIHSSNSTKKTYLSE-INVVGLAFFFNLGIVTPLIMFILTATLLILSLKRHTLHMGSNATG------------------------------------------------------------------------------------------------------------------------------------------------------SNDPSMEAHMGAIKAISYFLILYIFNAVALFIY-LSNM-F------------DINSLWNNLCQIIMAAYPASHSILLIQDNPGLRRAWKRLQLRLHLYPKEWTL |
| 3ODU Chain:A ((42-498)) | ---------------------------ENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQK---KLRSMTDKYRLHLSVADLLFVITLPFWA-VDAV-ANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIV---HATNSQ-RPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSE------ADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLEVLFQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ODU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242259 for 2070 contacts (-117.0/contact) +
2D Compatibility (PS) -29900 + (NN) -10489 + (LL) 1884
1D Compatibility (HY) -8400 + (ID) 1800
Total energy: -290964.0 ( -140.56 by residue)
QMean score : 0.258
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