Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLFYFSAIIASVILNFVGIIMNLFITVVNCKTWVKSHRISSSDRILFSLGITRFLMLGLFLVNTI-YF-VSSNTERSVY-LSAFFVLCFMFLDSSSVWFVTLLNILYCVKITNFQHSVFLLL--KRNISPKIPRLLLACVLISAFTTCLY-ITLSQASPFPELVTTRNNTSF-NISEGILSLVVSLVLSSSLQFIINVTSASLLIHSLRRHIQKMQKNATGFWNPQTEAHVGAMKLMVYFLILYIPYSVATLVQYLPFYAGMDMGTKSICLIFATLYSPGHSVLIIITHPKLKTTAKKILCFKK |
| 3PBL Chain:A ((41-230)) | --------YALSYCALILAIVFGNGLVCMAVLKE---RALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGV-WNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVM---PVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNT------TG---DPTVCSISN-PD-FVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129764 for 1209 contacts (-107.3/contact) +
2D Compatibility (PS) -18268 + (NN) -3950 + (LL) 2304
1D Compatibility (HY) -11600 + (ID) 1200
Total energy: -162478.0 ( -134.39 by residue)
QMean score : 0.211
|
|
|