Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH |
3G9R Chain:A ((1-42)) | -----------------------------------------------------------------ELDKWASLWNWFNITNWLWYIKI---EELKSKIKRIENEIKRIKK----------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2527 for 159 contacts (15.9/contact) +
2D Compatibility (PS) -4657 + (NN) -3749 + (LL) 12576
1D Compatibility (HY) -3600 + (ID) 400
Total energy: 2697.0 ( 16.96 by residue)
QMean score : 0.208
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