Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------ISCSTVYST---LMPCLQYVQQ-------------GGSPARGCCTGIQNLLVEANNSPDRRTICGCLENVANGASGGP----YITRAAALPSKCNVALPYKISPSVDCNSIH
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCM--------CPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM-------SQPCQM--
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46637 for 507 contacts (-92.0/contact) +
2D Compatibility (PS) -7506 + (NN) 135 + (LL) 608
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -58650.0 ( -115.68 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: