Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCDAL--QLSPCAGAIVGNAAPTAVCCSRMKA-----------QRPCMCQYARDPNLKQY--VNSPNGKKVLAACKVPVPSC
2ALG Chain:A ((3-79))
-TCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21534 for 372 contacts (-57.9/contact) +
2D Compatibility (PS) -6198 + (NN) -735 + (LL) 560
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -33607.0 ( -90.34 by residue)
QMean score : 0.122
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: