Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCNPSALSPCMSAIMLGAAPSPGCCVQLRA-----------QQPCLCQYARDPSYRSYVTSPSAQRAVKACNVKANC
1SIY Chain:A ((7-76))
----QGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR-GINPNNAEALPGKCGVN---
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27468 for 386 contacts (-71.2/contact) +
2D Compatibility (PS) -5757 + (NN) 2184 + (LL) 40
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -34051.0 ( -88.22 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: