Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------EDTGDTGNVGVTCDARQLQPCLAAITG---GGQPSGACCAKLTEQQSCLCGFAKNP---AFAQYISSPNARKVLLACNVAYPTC
1P68 Chain:A ((1-102))
MYGKLNDLLEDLQEVLKNLHKNWHGGKDNLHDVDNHLQNVIEDIHDFMQGGGSGGKLQEMMKEFQQVLDELNNHLQGGKHTVHHIEQNIKEIFHHLEELVHR-
General information:
TITO was launched using:
RESULT:
Template:
1P68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6535 for 491 contacts (-13.3/contact) +
2D Compatibility (PS) -8509 + (NN) -4139 + (LL) 56
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -21677.0 ( -44.15 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_1P68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P68-query.scw
PDB file :
Tito_Scwrl_1P68.pdb
: