Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VYRPWPSECVEVANVMVEQCKMFFVHQESPPTAECCRWFSSRRKYAK---ERRRLCRCLEFLTTAFKNLKPD-VLALSDQCHFSSGFPMSRDHTCA
2ALG Chain:A ((3-88))
-------TCGQVSSS-LAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNC-
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52864 for 541 contacts (-97.7/contact) +
2D Compatibility (PS) -8402 + (NN) -3590 + (LL) 688
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -70268.0 ( -129.89 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: