Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDNNPLEHCRDVFVSFMPCMGFVEGIFQQPSPDCCRGVTHLNNVVKFTSPGSR-NRQDSGETERVCLCIEIMGNANHLPFLPAAINNLPLRCSLTLSFPISVDMDCSQFRNTKNPDVEKLN--
4HLB Chain:A ((21-115))
-DSDRFTAFEEELLARYADKGIRSVDVAAYAK---------GIDIVFVAADRKMT------------------RAEFSAIASRSIRELKERFGFDKDVPIGAVLDYKKDAATDTRTRFVLKLR
General information:
TITO was launched using:
RESULT:
Template:
4HLB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39285 for 579 contacts (-67.8/contact) +
2D Compatibility (PS) -9524 + (NN) -2385 + (LL) 1880
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -51914.0 ( -89.66 by residue)
QMean score : 0.209
(partial model without unconserved sides chains):
PDB file :
Tito_4HLB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HLB-query.scw
PDB file :
Tito_Scwrl_4HLB.pdb
: