Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------------------------------------ALSCGTVSGYVAPCIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR-------------------- |
1L6W Chain:A ((1-220)) | MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLPQLHEAMGGQGRLFAQVMATTAEGMVNDALKLRSIIADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGG------SGIQTVTDLHQLLKMHAPQAKVLAA---SFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWQGAFGRTSI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37575 for 588 contacts (-63.9/contact) +
2D Compatibility (PS) -8680 + (NN) -2277 + (LL) 284
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -52198.0 ( -88.77 by residue)
QMean score : 0.252
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