Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APGCDTVDTDLAPCISYLQTGTGNPTVQCCSGVKTLAGTAQTTEDRKAICECIKTAAIRVKPVANAVKSLPGLCSVTLPFPISIATDCNKIV-------------------------
3UUN Chain:A ((338-453))
EVNLDRYQTALEEVLSWLLSAEDTLQAQG-EISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQ
General information:
TITO was launched using:
RESULT:
Template:
3UUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30791 for 500 contacts (-61.6/contact) +
2D Compatibility (PS) -8604 + (NN) 9040 + (LL) 56
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -33249.0 ( -66.50 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_3UUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UUN-query.scw
PDB file :
Tito_Scwrl_3UUN.pdb
: