Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISCTEAVAAMNPCLPFLIGAQAS-----------PVAPCCLAVQNVNQEASTKEIRRELCDCFKKAGPALGVKPDKAKQLPDLCHVQVPVPIDPTIDCSKVTEDIAW
1QZM Chain:A ((491-584))
-SGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLKH-----------IEINGD-NLHDYLGVQRF
General information:
TITO was launched using:
RESULT:
Template:
1QZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32296 for 550 contacts (-58.7/contact) +
2D Compatibility (PS) -8757 + (NN) -2882 + (LL) 1128
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -47007.0 ( -85.47 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_1QZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QZM-query.scw
PDB file :
Tito_Scwrl_1QZM.pdb
: