Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----ITCGQVASSLGPCLNYLKG----AGGTAPSAACCNGVRGINSAAKTTADRQTACQC---------------LKSAANGIPGLQPKLAESLP--GNCNVNIPYKISLSTNCQSIK-
4HR1 Chain:A ((3-120))
FNGAQTVIQKISWLRTAIAFLKGYMETTGATKKELEQVEKLKERVDEIATAVNWDVYAQYARGDFNLLSDDEYKEIQKALLVLEDIKEQIIVEMLRVGLAQGQMG-TLKISDYLDSLDS
General information:
TITO was launched using:
RESULT:
Template:
4HR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22609 for 565 contacts (-40.0/contact) +
2D Compatibility (PS) -9064 + (NN) 4044 + (LL) 92
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -32287.0 ( -57.15 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_4HR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HR1-query.scw
PDB file :
Tito_Scwrl_4HR1.pdb
: