Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAAR-------YPNIREDAASSLPYKCGVVINVPISKTTNCHEIN
2OCC Chain:E ((5-109))
HETDEEFDARWVTYFNKPDIDAWELRKGMNTLV----GYDLVPEPKIIDAALRACRR---LNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNEL-----GISTPEELGLDKV-
General information:
TITO was launched using:
RESULT:
Template:
2OCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32124 for 525 contacts (-61.2/contact) +
2D Compatibility (PS) -8240 + (NN) -2370 + (LL) 668
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -47016.0 ( -89.55 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_2OCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OCC-query.scw
PDB file :
Tito_Scwrl_2OCC.pdb
: