Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------ITCSDVNKA---LAPCVSYLT-------------GGGAPTSACCDGVRTLKSLSPTTSDRQTACQCAKDAASRNP-----NIREDAAAALPNKCGVQTDIPISRSTDCST
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCM--------CPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNL-------MSQPCQM
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20984 for 490 contacts (-42.8/contact) +
2D Compatibility (PS) -7671 + (NN) -1837 + (LL) 752
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -33690.0 ( -68.76 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: