Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------DISCSDVLN--DLSPCLPFLQGKAAKP--------------SESNNQCCDGVRALYAAADTRPDRQATCRCLKAAYVQV------------HAVLSAAQELPGDCGLSLSYNITPDIDCDKIE
1W2Q Chain:A ((1-127))
GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEM--------ENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDVSGGRCS
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33695 for 535 contacts (-63.0/contact) +
2D Compatibility (PS) -8765 + (NN) -2864 + (LL) 460
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -48814.0 ( -91.24 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: