Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPL--QLSPCAGAITGSGPPSATCCSRLRE-----------QTPCLCGYYRDPNLRQY--VNSPNAQKVARTCGVSVRC
2ALG Chain:A ((3-78))
-TCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSI--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22772 for 369 contacts (-61.7/contact) +
2D Compatibility (PS) -6188 + (NN) 1111 + (LL) 444
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -34855.0 ( -94.46 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: