Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCNTDLT---DLVSKCQRFVIK-----TGPKFSPSPSCCAVVKNVDVACVCDLITKEIEDMIDMDKM-------VYVARSCGKKISAGTKCGNTQANAGG--------IVSGYIVPTA
1HSS Chain:A ((5-124))
-MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEHGAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAY--PDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34015 for 580 contacts (-58.6/contact) +
2D Compatibility (PS) -8877 + (NN) -173 + (LL) 872
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -45343.0 ( -78.18 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: