Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------APSAAQCKEERRLGLNACKPVVYGRPPSPQCC-QRIRVTHIECVCPVVTPKLAALIDVNRAIRVIEGCGRRVPRHFKCGSKLSPPPIHMRFLQADL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
1DQA Chain:A ((41-449)) | LSDAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQYLPYRDYNYSLVMGACCENVIGYMPIPVGVAGPLCLDEKEFQVPMATTEGCLVASTNRGCRAIGLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETSEGFAVIKEAFDSTSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEKALSKLHEYFPEMQILAVSGNYCTDKKPAAINWIEGRGKSVVCEAVIPAKVVREVLKTTTEAMIEVNINKNLVGSAMAGSIGGYNAHAANIVTAIYIACGQDAAQNVGSSNCITLMEASGPTNEDLYISCTMPSIEIGTVGGGTNLLPQQACLQMLGVQGACKDNPGENARQLARIVCGTVMAGELSLMAALAAGHLVKSHMIHN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17799 for 421 contacts (-42.3/contact) +
2D Compatibility (PS) -9640 + (NN) 3329 + (LL) 0
1D Compatibility (HY) 800 + (ID) 950
Total energy: -24260.0 ( -57.62 by residue)
QMean score : 0.328
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