Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DQQVSACQNDIDALWRSCKQFVQKEGPKMPPSEDCCKTIKALDA--------HASCICDYVGSPDARNKLDLDKVFFVTKQCGVTVPKGCGSKQD----
1BWO Chain:A ((1-90))
-----IDCGHVDSLVRPCLSYVQGGP---GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCGVNLPYTISLNIDCSRV
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19320 for 518 contacts (-37.3/contact) +
2D Compatibility (PS) -7837 + (NN) -1551 + (LL) 384
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -32574.0 ( -62.88 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: