Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQ----VQSSLVACIPYLRS--------GGSPTQACCNGVKSLNNAAKTTADRQAACECLKTAAGSISGLSP---------------ANAASLPGKCGVNVPYKIS--TSTNCKNVK-----
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHI--------SEWCRCGALYSMLDS--MYKEHGAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38578 for 532 contacts (-72.5/contact) +
2D Compatibility (PS) -7707 + (NN) 1390 + (LL) 480
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -50115.0 ( -94.20 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: