Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCNPV--GLSPCAGAMSGSGPPSKLCCSKLRE-----------QKPCLCGYYRDPNLRQY--VDSPNAKKVATACDVHVTC
2ALG Chain:A ((3-78))
-TCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSI--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17528 for 369 contacts (-47.5/contact) +
2D Compatibility (PS) -6063 + (NN) 312 + (LL) 348
1D Compatibility (HY) -6000 + (ID) 950
Total energy: -29881.0 ( -80.98 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: