Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPPDTVALRLAPCASAAED-------PGSAPSGSCCSAVHAIGKQSPRCLCAVMLSNTA-------------RSAGIKAEVAITIPKRCNLADRPVGYKCGGNQAN--------
1HSS Chain:A ((5-124))
--MCYPGQAFQVPA-LPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36955 for 563 contacts (-65.6/contact) +
2D Compatibility (PS) -8563 + (NN) -3371 + (LL) -164
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -52403.0 ( -93.08 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: