Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--ETSLLAPSCADVTKAVAPCLNFLKGKGGADPSQACCDGARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPL----IAKKCNVDINIPPINDKTDCSKAVSSIMPKSL--------
3UUN Chain:A ((338-453))
EVNLDRYQTALEEVLSWLLSAEDTLQAQGEISND------VEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQ
General information:
TITO was launched using:
RESULT:
Template:
3UUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3502 for 611 contacts (-5.7/contact) +
2D Compatibility (PS) -10542 + (NN) -167 + (LL) 128
1D Compatibility (HY) -800 + (ID) 500
Total energy: -15383.0 ( -25.18 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_3UUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UUN-query.scw
PDB file :
Tito_Scwrl_3UUN.pdb
: