Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------TWEVKMAGAELSDAQCKEERNLGINACKPVVYGKLPSPECC-QRVRVTHLECVCPVISPQLAALIDINRAVRLIEGCGRRVPRHYKCGSITTP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
1DQA Chain:A ((41-449)) | LSDAEIIQLVNAKHIPAYKLETLIETHERGVSIRRQLLSKKLSEPSSLQYLPYRDYNYSLVMGACCEN----VIGYMPIPVGVAGPLCLDEKEFQVPMATTEGCLVASTNRGCRAIGLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETSEGFAVIKEAFDSTSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEKALSKLHEYFPEMQILAVSGNYCTDKKPAAINWIEGRGKSVVCEAVIPAKVVREVLKTTTEAMIEVNINKNLVGSAMAGSIGGYNAHAANIVTAIYIACGQDAAQNVGSSNCITLMEASGPTNEDLYISCTMPSIEIGTVGGGTNLLPQQACLQMLGVQGACKDNPGENARQLARIVCGTVMAGELSLMAALAAGHLVKSHMIHN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15471 for 399 contacts (-38.8/contact) +
2D Compatibility (PS) -8882 + (NN) 3759 + (LL) 172
1D Compatibility (HY) -800 + (ID) 750
Total energy: -21972.0 ( -55.07 by residue)
QMean score : 0.353
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