Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------ALTCDDVTGQ--LFPCLTYLTLRGKN--------------VRPPPQGCCNGVRRLNKQAQSKADRQKACNCIKG---LAGTFTGLNLDLVEGLPRRCNVNIPYKISPSTDCKKVN |
1W2Q Chain:A ((1-127)) | GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCDLDVSGGRCS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16503 for 625 contacts (-26.4/contact) +
2D Compatibility (PS) -9516 + (NN) 1822 + (LL) 0
1D Compatibility (HY) 0 + (ID) 650
Total energy: -24847.0 ( -39.76 by residue)
QMean score : 0.139
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