Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLSQVRTCTSAVIAPNQMPSQQCCSELSAITD---------FNCFCSMLLNQGTNLNQDYINNALLIPSKCGEQGRNLRGQRCGNYAIP
1AFH Chain:A ((8-78))
---ASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVSGLNAGNAASIPSKCGVS---------------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26871 for 434 contacts (-61.9/contact) +
2D Compatibility (PS) -6211 + (NN) -2158 + (LL) 628
1D Compatibility (HY) -400 + (ID) 1000
Total energy: -36012.0 ( -82.98 by residue)
QMean score : 0.115
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: