Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLQQVAGCLDAVTKGATPTGSCCTQLGQVDA----------PCFCNLLANGKYSDAYVNNALHVPARCGSNSAAYAKFKGRNCAGYVVP
1SIY Chain:A ((6-76))
--VQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVN------------------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17650 for 430 contacts (-41.0/contact) +
2D Compatibility (PS) -6033 + (NN) -1577 + (LL) 1168
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -27442.0 ( -63.82 by residue)
QMean score : 0.089
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: