Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAQCGGRNLSILAPCLPAAKANVQPSAACCRALSSFAT--NT----GEDCLCAAASSQQQSGAKVEFAKYIPQKCQLTYK----AGIVCNGVVIPGGQ
2ALG Chain:A ((4-90))
---CGQV-SSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCAT-------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32490 for 476 contacts (-68.3/contact) +
2D Compatibility (PS) -7987 + (NN) -3263 + (LL) 528
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -46712.0 ( -98.13 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: