Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SSDVCTVVSPVLESCYIALQSGESFMKSESVCCKSLEILENRIRDSDHQFTRYAVCECFKASDNDKQVLVN-ENLLEVQVLCGPHVPYPITSYSDCLQYADEEIARTAL
1BWO Chain:A ((3-88))
----CGHVDSLVRPCLSYVQGG-P--GPSGQCCDGVKNLHNQARSQ---SDRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLPYTISLNIDCS------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40312 for 560 contacts (-72.0/contact) +
2D Compatibility (PS) -8551 + (NN) -836 + (LL) 2092
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -51157.0 ( -91.35 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: