Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DDDATLDCDSQVNGLAGNCMTAVLIGTKPSSKCCKFVRSAQL----------DCLCSKITKDVTKMITEHLLNTALKIAKQCNWELP----HNYQCGSYTFP
1T12 Chain:A ((2-90))
-----ITCGQVTSNL-APCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGA-ISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39979 for 503 contacts (-79.5/contact) +
2D Compatibility (PS) -7388 + (NN) -1898 + (LL) 464
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -53551.0 ( -106.46 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: