Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACDATNNMGKLLPCRQAAVKNGKDPKQLAGCCDAVKPFSG-SKD----AADCLCQSLLAAQKVDKTVDLHSAIAIPAKCGIPVQ----ANLKCNGMAVPQH
1AFH Chain:A ((8-91))
-------ASAIAPCISYARGQGSGP--SAGCCSGVRSLNNAARTTADRRAACNC-LKNAAAGV-SGLNAGNAASIPSKCGVSIPYTISTSTDCSR------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36740 for 533 contacts (-68.9/contact) +
2D Compatibility (PS) -7857 + (NN) -4052 + (LL) 956
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -50843.0 ( -95.39 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: