Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVDCSAAQQAMFPCLSAAVGGNPPPPSVACCAAMKSVSK--------LEMCQCLVNQTSTVPGLNMTAARNIPANCNISAAADCS
1T12 Chain:A ((1-77))
AITCGQVTSNLAPCLAYLRNTG---PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNI-----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43362 for 463 contacts (-93.7/contact) +
2D Compatibility (PS) -7522 + (NN) -6115 + (LL) -180
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -62829.0 ( -135.70 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: