Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------TVPCGTVDMKAAACVGYATGKEPKPSPACCSGLQQLAGTVKTVDDKKNICRCLKNGVKAFAGVQDKFLSQIPAVCNIKVGFPVSLNTNCEA------------------------------------------------------ |
| 4B8V Chain:A ((36-224)) | CGSTSNIKYTVVKGDTLTSIAKKFKSGICNIVSVNKLANPNLIELGATLIIPENCSNPDNKSCVS----TPAEPTETCVPGLPG-SYTIVSGDTLTNISQDFNITLDSLIAANTQIENPDAIDVGQIITVPVCPSSQCEAVGTYNIVAGDLFVDLAATYHTTIGQIKALNNNVNPSKLKVGQQIILPQDCKNVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9132 for 465 contacts (-19.6/contact) +
2D Compatibility (PS) -9125 + (NN) -6095 + (LL) 292
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -26860.0 ( -57.76 by residue)
QMean score : 0.268
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