Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SQVNAPCTWTEISEEYDYCGDSLTRGVP------WVSPLKVCCDTIKLNKMKCICQVVTKTFSQNFD----------FYKLSKLSHACGDLLVPGSYCGGNYH--
2LSE Chain:A ((1-101))
----MQEERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDAPNAVMEQLLEEIEKLLKKAGSLVPRGSYLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2LSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43694 for 516 contacts (-84.7/contact) +
2D Compatibility (PS) -8515 + (NN) -910 + (LL) 204
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -54965.0 ( -106.52 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_2LSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LSE-query.scw
PDB file :
Tito_Scwrl_2LSE.pdb
: